STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY29569.1PAP2 family protein; KEGG: bce:BC2260 3.1e-15 phosphatidylglycerophosphatase B K01096; Psort location: CytoplasmicMembrane, score: 10.00. (276 aa)    
Predicted Functional Partners:
EKY25775.1
Hypothetical protein.
    
 0.843
EKY25397.1
KEGG: cpe:CPE1877 1.0e-62 glpQ; glycerophosphodiester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase; Psort location: Cytoplasmic, score: 9.97.
 
 0.793
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.767
uppP
Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
  
 
 0.767
EKY22726.1
PAP2 family protein; KEGG: cbe:Cbei_0844 6.1e-90 diacylglycerol kinase; K00901 diacylglycerol kinase; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.744
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
    
 0.742
EKY26101.1
KEGG: cbk:CLL_A2863 1.7e-101 V-type ATP synthase subunit C; K02119 V-type H+-transporting ATPase subunit C; Psort location: Cytoplasmic, score: 7.50.
    
 
 0.738
EKY29570.1
Amidohydrolase; KEGG: amt:Amet_2941 2.5e-84 amidohydrolase; Psort location: Cytoplasmic, score: 7.50.
     
 0.725
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
  
 0.667
EKY26102.1
KEGG: cpf:CPF_1891 8.1e-40 V-type ATP synthase subunit F K02122.
    
 
 0.644
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.