Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY29570.1Amidohydrolase; KEGG: amt:Amet_2941 2.5e-84 amidohydrolase; Psort location: Cytoplasmic, score: 7.50. (407 aa)    
Predicted Functional Partners:
EKY28426.1
Class II glutamine amidotransferase.
    
  0.806
EKY29569.1
PAP2 family protein; KEGG: bce:BC2260 3.1e-15 phosphatidylglycerophosphatase B K01096; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.727
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
    
 0.583
dapH
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.
 
  
 0.535
EKY23277.1
KEGG: cac:CA_C2723 1.3e-78 dipeptidase PepV; K01439 succinyl-diaminopimelate desuccinylase; Psort location: Cytoplasmic, score: 7.50.
    
 0.530
EKY29571.1
Hypothetical protein; KEGG: dgr:Dgri_GH24509 6.3e-07 GH24509 gene product from transcript GH24509-RA; K03514 DNA polymerase sigma subunit.
       0.527
EKY29568.1
Oxidoreductase, NAD-binding domain protein; KEGG: mgr:MGG_13811 7.8e-42 hypothetical protein; K00540; Psort location: Cytoplasmic, score: 7.50.
       0.510
EKY28352.1
Putative selenium metabolism hydrolase; KEGG: eci:UTI89_C3257 7.8e-145 ygeY; peptidase; Psort location: Cytoplasmic, score: 7.50.
    
 0.498
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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