Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY29584.1Hypothetical protein. (254 aa)    
Predicted Functional Partners:
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.775
EKY27619.1
Potassium uptake protein, TrkH family; KEGG: apb:SAR116_1886 2.0e-75 cation transporter K03498; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.632
EKY23999.1
Potassium uptake protein, TrkH family.
  
 
 0.632
EKY26632.1
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.590
EKY22607.1
Hypothetical protein.
  
     0.567
EKY29583.1
TIGR01906 family protein; KEGG: tet:TepyoMp11 0.0052 nad2; NADH dehydrogenase subunit 2 K03879; Psort location: CytoplasmicMembrane, score: 10.00.
       0.509
EKY23236.1
KEGG: cpr:CPR_1421 1.6e-178 hemD; uroporphyrinogen-III methyltransferase/synthase K13542; Psort location: Cytoplasmic, score: 7.50.
  
    0.472
EKY29585.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.467
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.447
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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