STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY29499.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (153 aa)    
Predicted Functional Partners:
EKY29500.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.81.
     0.982
EKY27624.1
Crossover junction endodeoxyribonuclease RusA; KEGG: dfe:Dfer_3850 0.0069 carboxyl-terminal protease K03797; Psort location: Cytoplasmic, score: 7.50.
  
     0.438
EKY27871.1
DnaD domain protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.436
EKY25128.1
Hypothetical protein; KEGG: bao:BAMF_0407 5.5e-09 rapH1; response regulator aspartate phosphatase; Psort location: Cytoplasmic, score: 7.50.
  
    0.426
EKY29501.1
Polysaccharide biosynthesis protein; KEGG: zin:ZICARI_097 0.0041 nuoM; putative NADH:ubiquinone oxidoreductase, membrane subunit M; K00342 NADH dehydrogenase I subunit M; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.420
EKY29502.1
Glycosyltransferase, group 2 family protein; KEGG: bsu:BSU34280 1.2e-38 epsJ; putative glycosyl transferase; Psort location: CytoplasmicMembrane, score: 9.51.
       0.406
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.