STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY29453.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (204 aa)    
Predicted Functional Partners:
EKY29452.1
KEGG: cbf:CLI_0473 1.4e-51 S54 family peptidase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.807
EKY29451.1
KEGG: cbt:CLH_0742 4.1e-251 pepF; oligoendopeptidase F K08602; Psort location: Cytoplasmic, score: 9.97.
       0.805
EKY29450.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.699
EKY28114.1
N-6 DNA Methylase; KEGG: gyc:GYMC61_0285 2.1e-105 N-6 DNA methylase; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.654
EKY29454.1
PAP2 family protein; KEGG: cbb:CLD_1099 3.2e-36 undecaprenyl-diphosphatase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.455
EKY28111.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.426
EKY27021.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.426
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.