Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY29461.1KEGG: cbt:CLH_0750 1.1e-188 recJ; single-stranded-DNA-specific exonuclease RecJ K07462; Psort location: Cytoplasmic, score: 7.50. (582 aa)    
Predicted Functional Partners:
EKY22199.1
KEGG: cpe:CPE0343 1.2e-217 recQ; ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ; Psort location: Cytoplasmic, score: 9.89.
   
 0.747
priA
Primosomal protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
 
     0.636
EKY29460.1
DJ-1 family protein; KEGG: gym:GYMC10_1577 4.6e-21 intracellular protease, PfpI family; K05520 protease I; Psort location: Cytoplasmic, score: 7.50.
       0.616
mutL
DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
  
  
 0.584
EKY29457.1
KEGG: cbe:Cbei_4324 0. DNA topoisomerase IV subunit B K02622; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.579
EKY26541.1
DNA protecting protein DprA.
 
   
 0.534
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
    0.523
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
 
    0.495
EKY29459.1
KEGG: cbe:Cbei_4323 8.9e-192 DNA topoisomerase IV subunit A K02621; Psort location: Cytoplasmic, score: 9.97.
     
 0.487
EKY25385.1
ABC1 family protein; KEGG: mbu:Mbur_1648 7.8e-81 2-octaprenylphenol hydroxylase K03688; Psort location: CytoplasmicMembrane, score: 8.78.
      0.484
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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