Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY29374.1PHP domain protein; KEGG: dat:HRM2_10850 2.2e-37 two domain fusion protein includes: metal-dependent phosphoesterase / ribonuclease III; Psort location: Cytoplasmic, score: 7.50. (288 aa)    
Predicted Functional Partners:
EKY27532.1
PTS system fructose-specific EIIABC component; KEGG: cbe:Cbei_1844 2.2e-234 PTS system, fructose subfamily, IIC subunit; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.793
EKY29375.1
KEGG: cbt:CLH_0758 5.8e-117 aspartate aminotransferase K00812.
       0.788
EKY29376.1
Hypothetical protein; KEGG: tte:TTE1368 1.2e-16 avtA3; aspartate aminotransferase K00812; Psort location: Cytoplasmic, score: 7.50.
       0.788
EKY29465.1
Pyruvate synthase; KEGG: cbt:CLH_0756 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: Cytoplasmic, score: 7.50.
    
  0.784
EKY25379.1
Pyruvate synthase; KEGG: cdc:CD196_2523 0. nifJ; pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
    
  0.784
EKY25396.1
Pyruvate synthase; KEGG: cbt:CLH_2077 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737.
    
  0.784
EKY29377.1
HAD hydrolase, family IB; KEGG: clj:CLJU_c09360 1.5e-61 phosphoserine phosphatase; Psort location: Cytoplasmic, score: 7.50.
       0.763
EKY29378.1
Aminotransferase, class IV; KEGG: cbt:CLH_0760 8.6e-68 enzyme of IlvE/PabC family; K00826 branched-chain amino acid aminotransferase; Psort location: Cytoplasmic, score: 7.50.
       0.656
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
      0.595
EKY29652.1
KEGG: bmq:BMQ_3353 6.3e-207 PTS system, beta-glucoside-specific IIABC component; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.567
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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