Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY29392.1Respiratory-chain NADH dehydrogenase, subunit; KEGG: ppd:Ppro_0595 1.5e-88 NADH dehydrogenase (ubiquinone) K00329; Psort location: Cytoplasmic, score: 9.97. (360 aa)    
Predicted Functional Partners:
EKY27033.1
KEGG: tte:TTE0125 4.7e-51 nuoB; NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; K00331 NADH dehydrogenase I subunit B; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.996
EKY29404.1
NADH ubiquinone oxidoreductase, subunit; KEGG: cpo:COPRO5265_0922 4.8e-42 hydrogenase-4 component I; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.986
EKY29402.1
Proton-translocating NADH-quinone oxidoreductase, chain; KEGG: tga:TGAM_0040 1.9e-88 mbhH; putative monovalent cation/H+ antiporter subunit D K05568; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.983
EKY29403.1
NADH dehydrogenase; KEGG: dds:Ddes_1881 7.6e-60 respiratory-chain NADH dehydrogenase subunit 1; K00337 NADH dehydrogenase I subunit H; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.977
EKY29405.1
4Fe-4S binding domain protein; KEGG: ecz:ECS88_2985 5.2e-13 hycF; formate hydrogenlyase complex iron-sulfur subunit; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.938
EKY27032.1
KEGG: tte:TTE0124 1.1e-56 nuoH; NADH:ubiquinone oxidoreductase subunit 1 (chain H); K00337 NADH dehydrogenase I subunit H; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.928
EKY29394.1
Hydrogenase accessory protein HypB; KEGG: pmo:Pmob_0551 3.7e-08 ArgK protein; K07588 LAO/AO transport system kinase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.884
EKY27036.1
4Fe-4S binding domain protein; KEGG: tte:TTE0128 6.6e-22 nuoI; formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); K00338 NADH dehydrogenase I subunit I.
 
 
 0.873
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.860
EKY29398.1
KEGG: mbu:Mbur_0132 7.7e-05 putative monovalent cation/H+ antiporter subunit A K05565; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.
 
 
 
 0.844
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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