Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY29326.1pro-sigmaK processing inhibitor BofA; Psort location: CytoplasmicMembrane, score: 10.00. (82 aa)    
Predicted Functional Partners:
EKY29325.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.648
EKY27024.1
Stage II sporulation protein M; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.622
EKY26662.1
sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
   
 0.607
EKY22275.1
Rod shape-determining protein MreD; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.595
EKY27760.1
PDZ/DHR/GLGF domain protein; KEGG: cyn:Cyan7425_3672 5.6e-05 2-alkenal reductase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.571
EKY29086.1
Hypothetical protein.
  
     0.561
EKY26965.1
Hypothetical protein.
  
     0.551
EKY23998.1
Putative sporulation protein YtxC.
  
     0.523
EKY27638.1
LysM domain protein; KEGG: fps:FP0019 0.00013 mltD; membrane-bound lytic murein transglycosylase D precursor K08307; Psort location: Cytoplasmic, score: 7.50.
  
     0.512
EKY29624.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.468
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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