Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY29268.1Respiratory-chain NADH dehydrogenase subunit; KEGG: ddd:Dda3937_00593 1.6e-26 rsxC, rnfC; inner membrane iron-sulfur protein in SoxR-reducing complex K03615; Psort location: Cytoplasmic, score: 7.50. (446 aa)    
Predicted Functional Partners:
EKY29465.1
Pyruvate synthase; KEGG: cbt:CLH_0756 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: Cytoplasmic, score: 7.50.
   
 0.976
EKY25379.1
Pyruvate synthase; KEGG: cdc:CD196_2523 0. nifJ; pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
   
 0.976
EKY25396.1
Pyruvate synthase; KEGG: cbt:CLH_2077 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737.
   
 0.976
EKY29370.1
Hypothetical protein; KEGG: cbk:CLL_A0790 9.0e-128 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737.
    
 0.952
EKY29269.1
BMC domain protein; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.944
EKY29266.1
Propanediol utilization protein PduL; KEGG: lsp:Bsph_2106 5.9e-37 acetate kinase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.909
EKY28426.1
Class II glutamine amidotransferase.
    
 0.894
EKY29258.1
Hypothetical protein; KEGG: thx:Thet_0993 4.1e-20 ATP/cobalamin adenosyltransferase.
 
 
 0.888
EKY29267.1
Putative carbon dioxide concentrating mechanism protein CcmL.
 
   
 0.882
folD
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
    
 0.841
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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