STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28999.1Replicative DNA helicase. (397 aa)    
Predicted Functional Partners:
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
 
 0.976
EKY29620.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
  
 
0.898
EKY24051.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.750
EKY27869.1
DNA replication protein DnaC; KEGG: apb:SAR116_1558 0.0015 ATPase K02313; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.748
dnaA
Replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 
 0.708
EKY24420.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.618
EKY29000.1
Hypothetical protein.
       0.613
dnaX
DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
 
 
 0.599
EKY26378.1
KEGG: cbt:CLH_0222 9.3e-197 tuf; elongation factor Tu; K02358 elongation factor EF-Tu; Psort location: Cytoplasmic, score: 9.97.
   
   0.592
EKY29318.1
Hypothetical protein; KEGG: cbk:CLL_A3447 2.7e-39 dnaX; DNA polymerase III subunits gamma and tau K02343; Psort location: Cytoplasmic, score: 7.50.
 
 
 
 0.589
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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