STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY29009.1Sortase, SrtB family; Psort location: Cytoplasmic, score: 7.50. (257 aa)    
Predicted Functional Partners:
EKY28358.1
Heme ABC transporter, heme-binding protein isdE; KEGG: bao:BAMF_3696 2.4e-07 RBAM_035840; iron compound ABC transporter, substrate-binding protein FeuA; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.455
EKY25835.1
Periplasmic binding protein; Psort location: CytoplasmicMembrane, score: 9.68.
  
  
 0.455
EKY29010.1
Hypothetical protein; KEGG: pfr:PFREUD_10120 2.3e-28 exopolysaccharide biosynthesis protein precursor (related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase precursor); Psort location: Cytoplasmic, score: 7.50.
       0.434
EKY24079.1
Isochorismatase family protein; KEGG: smr:Smar_0504 1.9e-15 isochorismatase hydrolase; K05993 isochorismatase; Psort location: Cytoplasmic, score: 7.50.
   
    0.428
EKY29079.1
Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
  
     0.401
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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