STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY29035.1KEGG: cbt:CLH_3211 5.0e-63 putative tyrosine-protein phosphatase CapC K01104; Psort location: Cytoplasmic, score: 7.50. (254 aa)    
Predicted Functional Partners:
EKY29070.1
Chain length determinant protein; KEGG: cth:Cthe_1363 1.3e-30 lipopolysaccharide biosynthesis K08252.
 
 
 0.953
EKY29028.1
Chain length determinant protein; KEGG: cth:Cthe_1363 4.7e-20 lipopolysaccharide biosynthesis K08252; Psort location: CytoplasmicMembrane, score: 9.87.
 
 
 0.900
EKY29069.1
Capsular exopolysaccharide family protein; KEGG: cbt:CLH_3212 1.9e-40 tyrosine-protein kinase etk; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.896
EKY29027.1
KEGG: cbe:Cbei_4741 1.9e-56 exopolysaccharide tyrosine-protein kinase; Psort location: CytoplasmicMembrane, score: 9.51.
  
 0.891
EKY29822.1
Chain length determinant protein; KEGG: cth:Cthe_1363 4.4e-17 lipopolysaccharide biosynthesis K08252.
 
 
 0.889
EKY29823.1
Capsular exopolysaccharide family protein; KEGG: cbt:CLH_3212 1.4e-51 tyrosine-protein kinase etk; Psort location: CytoplasmicMembrane, score: 9.51.
  
 0.889
EKY29474.1
Glycosyltransferase, group 2 family protein; KEGG: chu:CHU_1044 4.9e-32 b-glycosyltransferase.
  
  
 0.655
EKY28059.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
    
   0.473
spoIIAB
Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
    
   0.473
EKY26629.1
Putative serine/threonine-protein kinase PrkC.
    
 
 0.467
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.