Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EKY29076.1Prepilin-type cleavage/methylation protein. (140 aa)    
Predicted Functional Partners:
EKY28789.1
Prepilin-type cleavage/methylation protein; KEGG: rce:RC1_1500 0.0035 rpoZ; DNA-directed RNA polymerase, omega subunit, putative K03060.
    
  0.791
EKY28792.1
General secretory system II, protein E protein; KEGG: apb:SAR116_2518 4.4e-09 type II secretion system PilB K02652; Psort location: Cytoplasmic, score: 9.97.
 
 0.615
EKY28791.1
KEGG: pen:PSEEN2333 9.4e-62 XcpR-2; type II secretion pathway protein E K02454; Psort location: Cytoplasmic, score: 9.97.
  
 0.556
EKY26977.1
General secretory pathway protein E family protein; KEGG: cco:CCC13826_1231 2.3e-67 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.97.
  
 0.556
EKY22134.1
Tetratricopeptide repeat protein; KEGG: hor:Hore_12160 4.2e-06 peptidyl-prolyl cis-trans isomerase; Psort location: Cytoplasmic, score: 7.50.
  
     0.534
EKY22361.1
Fimbrial assembly protein PilN.
 
  
 0.503
EKY28790.1
Bacterial type II secretion system protein F domain protein; KEGG: apb:SAR116_2517 1.8e-42 type II secretion system PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.495
EKY26978.1
Bacterial type II secretion system protein F domain protein; KEGG: apb:SAR116_2517 1.1e-15 type II secretion system PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.495
EKY22373.1
Hypothetical protein; KEGG: cbl:CLK_2505 9.4e-38 putative N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score: 7.50.
   
    0.462
rimO
Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
   
    0.445
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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