STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY29080.1Sel1 repeat protein. (881 aa)    
Predicted Functional Partners:
EKY29643.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: amt:Amet_1278 2.1e-41 integral membrane sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
    
 0.600
EKY27891.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cbe:Cbei_4925 2.6e-57 PAS/PAC sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
    
 0.600
EKY29083.1
Putative arginine ABC transporter, permease protein ArtQ.
     
 0.464
EKY29639.1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34. Belongs to the MnmG family.
   
   0.463
EKY29640.1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34. Belongs to the MnmG family.
   
   0.463
EKY29081.1
Hypothetical protein.
       0.463
EKY29082.1
Putative arginine ABC transporter, ATP-binding protein ArtM.
       0.463
EKY27055.1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; KEGG: kol:Kole_0031 3.6e-06 tRNA (uracil-5-)-methyltransferase Gid K04094; Psort location: Cytoplasmic, score: 7.50.
   
   0.463
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.454
EKY23867.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.445
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.