STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY29105.1Hypothetical protein. (114 aa)    
Predicted Functional Partners:
EKY29104.1
Hypothetical protein.
 
     0.955
EKY22773.1
KEGG: npu:Npun_F4337 1.1e-05 anti-sigma-factor antagonist and sugar transfersase.
  
 
 0.791
EKY22771.1
RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
 
 0.756
EKY23319.1
KEGG: ebr:ECB_01448 7.3e-25 yddV; predicted diguanylate cyclase; K13069 diguanylate cyclase; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.649
EKY28457.1
Iron-only hydrogenase maturation rSAM protein HydG; KEGG: hor:Hore_19320 8.0e-120 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 7.50.
   
    0.647
EKY26629.1
Putative serine/threonine-protein kinase PrkC.
    
 
 0.577
EKY28827.1
Hypothetical protein.
  
 
 
 0.573
EKY28829.1
Diguanylate cyclase domain protein; KEGG: hse:Hsero_3016 1.2e-27 response regulator protein; K11444 two-component system, chemotaxis family, response regulator WspR; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.564
EKY29086.1
Hypothetical protein.
  
     0.552
EKY27374.1
Diguanylate cyclase domain protein.
  
  
 0.535
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.