STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28891.1KEGG: hpa:HPAG1_1162 8.5e-29 ABC transporter, ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 9.51. (284 aa)    
Predicted Functional Partners:
EKY28890.1
KEGG: bal:BACI_c40440 8.0e-17 GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
 
    0.955
EKY28892.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.826
EKY29083.1
Putative arginine ABC transporter, permease protein ArtQ.
    
 0.599
EKY29692.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 9.35.
 
 
 0.583
EKY29693.1
ABC-2 type transporter; KEGG: phu:Phum_PHUM026790 0.00021 ABC transporter, putative; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.538
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.538
EKY25773.1
ABC-2 type transporter.
  
 0.528
EKY26682.1
Hypothetical protein.
  
 0.515
EKY28901.1
ABC transporter, permease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.514
EKY27756.1
ABC-2 type transporter; KEGG: bsb:Bresu_2062 0.0029 NADH dehydrogenase (quinone) K05561; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.512
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.