EKY28903.1 protein (Clostridium celatum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Clostridium celatum

NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EKY23482.1	EKY28903.1	HMPREF0216_02918	HMPREF0216_00498	Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.581
EKY28901.1	EKY28902.1	HMPREF0216_00496	HMPREF0216_00497	ABC transporter, permease family protein; Psort location: CytoplasmicMembrane, score: 10.00.	KEGG: lwe:lwe1990 6.0e-67 ABC transporter, ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78.	0.976
EKY28901.1	EKY28903.1	HMPREF0216_00496	HMPREF0216_00498	ABC transporter, permease family protein; Psort location: CytoplasmicMembrane, score: 10.00.	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.535
EKY28902.1	EKY28901.1	HMPREF0216_00497	HMPREF0216_00496	KEGG: lwe:lwe1990 6.0e-67 ABC transporter, ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78.	ABC transporter, permease family protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.976
EKY28902.1	EKY28903.1	HMPREF0216_00497	HMPREF0216_00498	KEGG: lwe:lwe1990 6.0e-67 ABC transporter, ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78.	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.538
EKY28903.1	EKY23482.1	HMPREF0216_00498	HMPREF0216_02918	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.	0.581
EKY28903.1	EKY28901.1	HMPREF0216_00498	HMPREF0216_00496	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	ABC transporter, permease family protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.535
EKY28903.1	EKY28902.1	HMPREF0216_00498	HMPREF0216_00497	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	KEGG: lwe:lwe1990 6.0e-67 ABC transporter, ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78.	0.538
EKY28903.1	EKY29779.1	HMPREF0216_00498	HMPREF0216_00023	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	SanA domain protein; Psort location: CytoplasmicMembrane, score: 9.99.	0.491
EKY28903.1	map	HMPREF0216_00498	HMPREF0216_00499	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	0.502
EKY29779.1	EKY28903.1	HMPREF0216_00023	HMPREF0216_00498	SanA domain protein; Psort location: CytoplasmicMembrane, score: 9.99.	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.491
map	EKY28903.1	HMPREF0216_00499	HMPREF0216_00498	Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.502