Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY28919.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16. (110 aa)    
Predicted Functional Partners:
EKY28918.1
Arylsulfatase; KEGG: bmq:BMQ_0208 1.5e-41 sulfatase; Psort location: CytoplasmicMembrane, score: 9.35.
       0.536
EKY26203.1
LPXTG-motif protein cell wall anchor domain protein.
  
     0.515
EKY22245.1
YhhN-like protein; KEGG: smf:Smon_1385 2.7e-05 signal transduction histidine kinase-like protein; K00936; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.442
EKY23220.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.402
EKY26328.1
C4-dicarboxylate transporter/malic acid transport protein.
  
     0.401
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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