STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28928.1KEGG: rlt:Rleg2_4805 3.4e-29 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00. (437 aa)    
Predicted Functional Partners:
EKY28927.1
KEGG: vfi:VF_A1053 2.4e-08 MerR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
       0.496
EKY28929.1
Helicase protein; KEGG: mpu:MYPU_4320 2.9e-14 hsdR; restriction modification enzyme subunit R2 K01153; Psort location: Cytoplasmic, score: 7.50.
       0.486
EKY23553.1
Hypothetical protein; KEGG: mcu:HMPREF0573_11599 5.4e-08 pphA; Ser/Thr and Tyr protein phosphatase (dual specificity); Psort location: CytoplasmicMembrane, score: 9.35.
   
   0.405
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.