STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28931.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.36. (270 aa)    
Predicted Functional Partners:
EKY28930.1
LemA family protein.
 
    0.965
EKY26446.1
FAD dependent oxidoreductase; KEGG: ctc:CTC00417 9.5e-101 oxidoreductase K00100; Psort location: Cytoplasmic, score: 7.50.
  
   0.798
EKY29412.1
Hypothetical protein; KEGG: sso:SSO9221 0.0037 rpoM-2; DNA-directed RNA polymerase, subunit M (RpoM-2) K03057; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.614
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.551
EKY28929.1
Helicase protein; KEGG: mpu:MYPU_4320 2.9e-14 hsdR; restriction modification enzyme subunit R2 K01153; Psort location: Cytoplasmic, score: 7.50.
       0.514
EKY28888.1
Mg2+ transporter-C family protein; KEGG: hip:CGSHiEE_08975 2.1e-25 coaD; phosphopantetheine adenylyltransferase K07507; Psort location: CytoplasmicMembrane, score: 10.00.
 
      0.498
EKY27422.1
Hypothetical protein; KEGG: tva:TVAG_332600 1.6e-09 hypothetical protein; K10866 DNA repair protein RAD50.
  
  
 0.417
EKY27038.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.417
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.