Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY28840.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (155 aa)    
Predicted Functional Partners:
EKY27390.1
GDSL-like protein.
  
     0.589
EKY24410.1
Hypothetical protein; KEGG: mba:Mbar_A3234 0.0014 ksgA; dimethyladenosine transferase K02528; Psort location: Cytoplasmic, score: 7.50.
  
     0.582
EKY22777.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.532
EKY28839.1
Hypothetical protein; KEGG: msy:MS53_0535 1.5e-06 putative citrate lyase beta chain K01644; Psort location: Cytoplasmic, score: 7.50.
       0.470
EKY23739.1
KEGG: cbt:CLH_3299 1.4e-81 hypothetical protein; K03101 signal peptidase II; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.450
EKY28841.1
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; KEGG: ctu:Ctu_37370 1.5e-31 gltP; glutamate/aspartate:proton symporter K11102; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.415
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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