STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28793.1KEGG: cbe:Cbei_4219 1.5e-77 peptidase A24A domain-containing protein; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (249 aa)    
Predicted Functional Partners:
EKY28790.1
Bacterial type II secretion system protein F domain protein; KEGG: apb:SAR116_2517 1.8e-42 type II secretion system PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.937
EKY28792.1
General secretory system II, protein E protein; KEGG: apb:SAR116_2518 4.4e-09 type II secretion system PilB K02652; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.932
EKY28791.1
KEGG: pen:PSEEN2333 9.4e-62 XcpR-2; type II secretion pathway protein E K02454; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.901
EKY26978.1
Bacterial type II secretion system protein F domain protein; KEGG: apb:SAR116_2517 1.1e-15 type II secretion system PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.879
EKY26977.1
General secretory pathway protein E family protein; KEGG: cco:CCC13826_1231 2.3e-67 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.857
EKY26664.1
Twitching mobility protein.
 
   
 0.850
EKY22360.1
Type IV pilus assembly protein PilM; KEGG: edi:EDI_273920 5.1e-06 E3 ubiquitin protein ligase BRE1A.
 
  
 0.830
EKY26541.1
DNA protecting protein DprA.
  
  
 0.684
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
     
 0.673
EKY28789.1
Prepilin-type cleavage/methylation protein; KEGG: rce:RC1_1500 0.0035 rpoZ; DNA-directed RNA polymerase, omega subunit, putative K03060.
 
  
 0.632
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.