STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28727.1Putative L-fucose mutarotase; KEGG: bcr:BCAH187_A3219 4.7e-44 fucose transport protein; K02431 L-fucose mutarotase; Psort location: Cytoplasmic, score: 9.97; Belongs to the RbsD / FucU family. (141 aa)    
Predicted Functional Partners:
fucI
Arabinose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
 
  
 0.861
EKY28724.1
Sugar-binding domain protein; KEGG: tex:Teth514_0166 9.6e-12 monosaccharide-transporting ATPase K10439.
 
   
 0.754
EKY29253.1
Hypothetical protein; KEGG: cob:COB47_0778 2.2e-37 rhamnulokinase K00848; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.706
EKY29254.1
Hypothetical protein; KEGG: cob:COB47_0778 6.1e-74 rhamnulokinase K00848.
 
 
 0.689
EKY28725.1
Putative ribose transport system permease protein RbsC; KEGG: cpy:Cphy_2011 2.8e-92 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.596
EKY28726.1
KEGG: cpy:Cphy_2010 3.0e-159 ABC transporter related; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
     
 0.538
EKY26597.1
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
 
      0.497
EKY29256.1
Class II Aldolase and Adducin domain protein; KEGG: cpf:CPF_1051 1.3e-41 fucA; L-fuculose phosphate aldolase K01628; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.416
EKY28189.1
Fructose-1,6-bisphosphate aldolase, class II.
 
  
  0.406
EKY28731.1
Class II aldolase, tagatose bisphosphate family; KEGG: cdf:CD3074 1.3e-117 gatY; tagatose-bisphosphate aldolase K08302; Psort location: Cytoplasmic, score: 7.50.
 
  
  0.405
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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