Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY28729.1Helicase protein; KEGG: bpb:bpr_IV062 2.6e-73 helicase domain-containing protein; Psort location: Cytoplasmic, score: 7.50. (453 aa)    
Predicted Functional Partners:
EKY28728.1
Hypothetical protein; KEGG: edi:EDI_244870 0.0038 DNA repair and recombination protein RAD54B.
      0.948
EKY28730.1
Hypothetical protein.
       0.714
EKY27133.1
Hypothetical protein; KEGG: cbk:CLL_A3399 2.4e-33 fusA; elongation factor G; K02355 elongation factor EF-G; Psort location: Cytoplasmic, score: 9.67.
  
 0.662
EKY25417.1
KEGG: ate:Athe_0809 7.1e-64 elongation factor G; K02355 elongation factor EF-G; Psort location: Cytoplasmic, score: 9.97.
  
 0.662
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
   
 0.616
EKY27132.1
KEGG: cbe:Cbei_4897 1.2e-214 fusA; elongation factor G; K02355 elongation factor EF-G; Psort location: Cytoplasmic, score: 9.97.
   
 0.616
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
   0.544
EKY29791.1
Putative peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.543
EKY22488.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.543
EKY26094.1
Hypothetical protein; KEGG: gfo:GFO_2687 3.4e-05 L-sorbosone dehydrogenase K00100.
  
     0.512
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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