STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28748.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gfo:GFO_0036 6.4e-118 two-component system sensor histidine kinase/response regulator hybrid K00936; Psort location: CytoplasmicMembrane, score: 9.99. (1074 aa)    
Predicted Functional Partners:
EKY27374.1
Diguanylate cyclase domain protein.
 
 0.966
EKY27434.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cbe:Cbei_4484 2.1e-22 multi-sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
0.884
EKY27891.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cbe:Cbei_4925 2.6e-57 PAS/PAC sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
0.856
EKY23319.1
KEGG: ebr:ECB_01448 7.3e-25 yddV; predicted diguanylate cyclase; K13069 diguanylate cyclase; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.842
EKY29643.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: amt:Amet_1278 2.1e-41 integral membrane sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
0.828
EKY28749.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gfo:GFO_0036 4.4e-119 two-component system sensor histidine kinase/response regulator hybrid K00936; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 
0.754
EKY29075.1
KEGG: npu:Npun_R2420 1.3e-14 two component LuxR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.67.
 
 0.729
EKY27883.1
KEGG: bde:BDP_0386 6.1e-35 vicR; response regulator protein VicR K07776; Psort location: Cytoplasmic, score: 9.97.
  
   0.720
EKY26449.1
Response regulator ArlR; KEGG: bde:BDP_0386 3.7e-44 vicR; response regulator protein VicR K07776; Psort location: Cytoplasmic, score: 9.97.
 
   0.712
EKY23560.1
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: npu:Npun_F4214 2.0e-36 two component transcriptional regulator K07657; Psort location: Cytoplasmic, score: 9.97.
  
   0.707
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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