STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28751.1LysM domain protein; KEGG: ddf:DEFDS_1862 4.7e-06 lytic transglycosylase catalytic; K08307 membrane-bound lytic murein transglycosylase D. (418 aa)    
Predicted Functional Partners:
EKY28750.1
4Fe-4S binding domain protein; KEGG: cpr:CPR_0261 9.0e-144 hydrogenase subunit (ferredoxin) K00532; Psort location: Cytoplasmic, score: 7.50.
       0.441
EKY26349.1
Transcriptional regulator, MarR family; KEGG: dsh:Dshi_0779 0.00010 transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
     0.423
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.