Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY28751.1LysM domain protein; KEGG: ddf:DEFDS_1862 4.7e-06 lytic transglycosylase catalytic; K08307 membrane-bound lytic murein transglycosylase D. (418 aa)    
Predicted Functional Partners:
EKY28750.1
4Fe-4S binding domain protein; KEGG: cpr:CPR_0261 9.0e-144 hydrogenase subunit (ferredoxin) K00532; Psort location: Cytoplasmic, score: 7.50.
       0.441
EKY27654.1
Ribose-5-phosphate isomerase B; KEGG: cbe:Cbei_0407 2.2e-60 RpiB/LacA/LacB family sugar-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 7.50.
    
  0.425
EKY26349.1
Transcriptional regulator, MarR family; KEGG: dsh:Dshi_0779 0.00010 transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
     0.423
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
     
  0.418
EKY26627.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
  0.418
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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