Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY28752.1KEGG: cbk:CLL_A2952 2.8e-227 lipid A export ATP-binding/permease protein MsbA; Psort location: CytoplasmicMembrane, score: 10.00. (616 aa)    
Predicted Functional Partners:
EKY28753.1
KEGG: bde:BDP_0153 6.1e-151 ABC-type transporter, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
0.901
EKY25767.1
ABC transporter, ATP-binding protein.
 
 
 
0.572
EKY22057.1
KEGG: bde:BDP_1654 5.9e-140 ATP-binding protein of ABC transporter system; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
0.554
EKY29562.1
KEGG: aai:AARI_31150 8.1e-111 putative ABC transporter, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
0.549
EKY28754.1
KEGG: shm:Shewmr7_3265 0.00038 MarR family transcriptional regulator; K03828 putative acetyltransferase.
       0.522
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
  
 0.421
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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