Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY28759.1Transcriptional regulator, Fur family; KEGG: mct:MCR_0333 3.0e-10 fur; ferric uptake regulation protein Fur K03711; Psort location: Cytoplasmic, score: 9.67; Belongs to the Fur family. (144 aa)    
Predicted Functional Partners:
EKY28758.1
ABC 3 transport family protein; KEGG: apb:SAR116_2225 2.9e-28 ABC transporter, membrane spanning protein, zinc K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.872
EKY28426.1
Class II glutamine amidotransferase.
    
 0.857
EKY26084.1
Transcriptional regulator, Fur family; Belongs to the Fur family.
  
     0.708
EKY29450.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.705
EKY28757.1
ABC transporter, ATP-binding domain protein; KEGG: cce:Ccel_3414 7.5e-37 ABC transporter related; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
     
 0.660
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.614
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
  
 
 0.585
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.547
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.495
EKY26247.1
KEGG: cbt:CLH_1037 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
    
 0.491
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.