Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EKY28761.1 | EKY28762.1 | HMPREF0216_00609 | HMPREF0216_00610 | Nucleotidyltransferase domain protein; Psort location: Cytoplasmic, score: 7.50. | Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 8.78. | 0.418 |
| EKY28762.1 | EKY28761.1 | HMPREF0216_00610 | HMPREF0216_00609 | Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 8.78. | Nucleotidyltransferase domain protein; Psort location: Cytoplasmic, score: 7.50. | 0.418 |
| EKY28762.1 | EKY28763.1 | HMPREF0216_00610 | HMPREF0216_00611 | Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 8.78. | Hypothetical protein. | 0.540 |
| EKY28762.1 | codY | HMPREF0216_00610 | HMPREF0216_01723 | Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 8.78. | GTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | 0.419 |
| EKY28763.1 | EKY28762.1 | HMPREF0216_00611 | HMPREF0216_00610 | Hypothetical protein. | Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 8.78. | 0.540 |
| codY | EKY28762.1 | HMPREF0216_01723 | HMPREF0216_00610 | GTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 8.78. | 0.419 |