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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rexPutative redox-sensing transcriptional repressor Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (211 aa)    
Predicted Functional Partners:
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
    0.986
EKY28591.1
KEGG: cbk:CLL_A0373 5.1e-109 crt; 3-hydroxybutyryl-CoA dehydratase K01715; Psort location: Cytoplasmic, score: 7.50; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.801
EKY28590.1
KEGG: cpr:CPR_2286 8.0e-175 bcd; butyryl-CoA dehydrogenase K00248; Psort location: Cytoplasmic, score: 9.97.
     
 0.772
EKY28587.1
KEGG: cbe:Cbei_0325 9.7e-131 3-hydroxybutyryl-CoA dehydrogenase K00074; Psort location: Cytoplasmic, score: 7.50.
     
 0.746
codY
GTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.
   
  
 0.624
EKY28589.1
KEGG: apb:SAR116_1870 2.5e-22 electron transfer flavoprotein beta-subunit K03521; Psort location: Cytoplasmic, score: 7.50.
     
 0.620
buk
Butyrate kinase; KEGG: cbt:CLH_0297 2.7e-142 buk; butyrate kinase K00929; Psort location: Cytoplasmic, score: 9.97; Belongs to the acetokinase family.
      
 0.570
EKY27657.1
KEGG: cbe:Cbei_0411 9.3e-181 acetyl-CoA acetyltransferase K00626; Psort location: Cytoplasmic, score: 9.97; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.557
EKY28588.1
KEGG: apb:SAR116_1869 1.4e-42 electron transfer flavoprotein alpha-subunit K03522; Psort location: Cytoplasmic, score: 7.50.
     
 0.533
hfq
RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.
      
 0.513
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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