STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28643.1Resolvase protein; KEGG: apb:SAR116_1288 3.6e-05 resolvase, N-terminal domain protein. (535 aa)    
Predicted Functional Partners:
EKY28640.1
Resolvase protein; KEGG: fnu:FN0522 0.00058 exonuclease SBCC K03546; overlaps another CDS with the same product name.
 
     0.757
EKY28642.1
Hypothetical protein.
       0.714
EKY28641.1
Resolvase protein; KEGG: zin:ZICARI_070 0.0010 gltX; putative glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase; overlaps another CDS with the same product name.
 
    
0.673
EKY26544.1
Resolvase protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.595
EKY28639.1
Hypothetical protein; Psort location: Extracellular, score: 8.91.
       0.502
EKY28089.1
DNA (cytosine-5-)-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.437
EKY27167.1
Site-specific tyrosine recombinase XerC; KEGG: apb:SAR116_1837 1.3e-27 phage integrase family protein K03733; Psort location: Cytoplasmic, score: 9.97; Belongs to the 'phage' integrase family.
  
  
 0.417
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.