STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28651.1KEGG: bmq:BMQ_3150 1.2e-09 sortase family protein K07284. (202 aa)    
Predicted Functional Partners:
EKY28650.1
Hypothetical protein; KEGG: smf:Smon_0763 0.0069 riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 7.50.
     
 0.615
EKY28649.1
KEGG: cpe:CPE2313 3.9e-95 hypothetical protein; K06182 ribosomal large subunit pseudouridine synthase F; Psort location: Cytoplasmic, score: 9.97.
       0.503
EKY27532.1
PTS system fructose-specific EIIABC component; KEGG: cbe:Cbei_1844 2.2e-234 PTS system, fructose subfamily, IIC subunit; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.497
EKY24021.1
Pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
     
 0.486
EKY26192.1
LPXTG-motif protein cell wall anchor domain protein; Belongs to the 5'-nucleotidase family.
  
  
 0.475
EKY28581.1
Cna protein B-type domain protein.
    
 0.448
EKY25993.1
TQXA domain protein.
    
 0.448
EKY22158.1
Hypothetical protein; KEGG: pyo:PY01794 6.5e-18 peptidyl prolyl cis-trans isomerase; K12735 peptidyl-prolyl cis-trans isomerase-like 4; Psort location: Cytoplasmic, score: 7.50.
    
 0.448
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
       0.418
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.