Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY28544.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (260 aa)    
Predicted Functional Partners:
EKY28543.1
Hypothetical protein; KEGG: gox:GOX1630 3.8e-65 putative oxidoreductase K00100.
     0.993
EKY28545.1
YbbR-like protein.
       0.481
dacA
TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
       0.481
EKY28542.1
KEGG: cbt:CLH_0296 1.5e-127 ptb; phosphate butyryltransferase K00634; Psort location: Cytoplasmic, score: 7.50.
       0.441
buk
Butyrate kinase; KEGG: cbt:CLH_0297 2.7e-142 buk; butyrate kinase K00929; Psort location: Cytoplasmic, score: 9.97; Belongs to the acetokinase family.
       0.418
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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