STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28409.1ABC transporter, ATP-binding protein. (152 aa)    
Predicted Functional Partners:
EKY28407.1
Putative glycine betaine/carnitine/choline transport system permease protein opuCD; KEGG: saa:SAUSA300_0707 6.8e-43 osmoprotectant ABC transporter, permease K05845:K05846; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
EKY28408.1
ABC transporter, substrate-binding protein, QAT family.
 
 0.999
EKY28410.1
Hypothetical protein.
     0.946
EKY28757.1
ABC transporter, ATP-binding domain protein; KEGG: cce:Ccel_3414 7.5e-37 ABC transporter related; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.486
EKY28411.1
Hypothetical protein.
       0.436
EKY22096.1
ABC transporter, ATP-binding protein; KEGG: tga:TGAM_1852 6.9e-82 malK-3; ABC-type transport system, ATPase component, putative maltose/maltodextrin transporter (MalK) K02023; Psort location: CytoplasmicMembrane, score: 9.96.
  
  
 
0.432
cysS
cysteine--tRNA ligase; KEGG: cpe:CPE2427 1.2e-212 cysS; cysteinyl-tRNA synthetase K01883; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.413
potA
Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
  
 
0.408
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.