Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY28453.1KEGG: pyo:PY05447 9.6e-06 hypothetical protein; K11131 H/ACA ribonucleoprotein complex subunit 4. (546 aa)    
Predicted Functional Partners:
EKY27532.1
PTS system fructose-specific EIIABC component; KEGG: cbe:Cbei_1844 2.2e-234 PTS system, fructose subfamily, IIC subunit; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.793
EKY28454.1
Dehydrogenase, FMN-dependent; KEGG: tye:THEYE_A0075 1.1e-65 hydroxyacid oxidase 1; Psort location: Cytoplasmic, score: 7.50.
     
 0.619
EKY28739.1
KEGG: sth:STH1249 3.1e-63 agaB; PTS system N-acetylgalactosamine-specific IIB component; K02745 PTS system, N-acetylgalactosamine-specific IIB component; Psort location: Cytoplasmic, score: 9.97.
     
  0.567
EKY28740.1
KEGG: vfi:VF_A1002 5.9e-37 agaC; PTS system, N-acetylgalactosamine-specific IIC component K02746; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.567
EKY28741.1
KEGG: eco:b3140 4.7e-51 agaD, ECK3128, JW3109, yraF; N-acetylgalactosamine-specific enzyme IID component of PTS K10986; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.567
EKY28364.1
Hypothetical protein.
 
  
  0.518
EKY28362.1
KEGG: bmq:BMQ_0937 9.1e-80 glycosyl transferase domain protein, group 2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
  0.509
EKY28451.1
Ser/Thr phosphatase family protein; KEGG: ddi:DDB_G0282265 1.6e-07 sgmC; metallophosphoesterase domain-containing protein; K01128.
       0.491
EKY28452.1
Hypothetical protein; KEGG: bao:BAMF_3871 7.5e-21 MAP/microtubule affinity-regulating kinase 3 RBAM_037570; Psort location: Cytoplasmic, score: 7.50.
       0.491
EKY29053.1
KEGG: chu:CHU_3450 0.00096 hypothetical protein K01238; Psort location: Cytoplasmic, score: 7.50.
    
 0.483
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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