Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EKY28456.1Iron-only hydrogenase maturation rSAM protein HydE; KEGG: cno:NT01CX_1484 1.1e-127 biotin synthase K01012; Psort location: Cytoplasmic, score: 7.50. (382 aa)    
Predicted Functional Partners:
EKY28458.1
Hydrogenase maturation GTPase HydF; KEGG: fta:FTA_1243 1.7e-12 trmE; tRNA modification GTPase TrmE K03650; Psort location: Cytoplasmic, score: 9.97.
   
 0.993
EKY28455.1
Putative iron-only hydrogenase system regulator.
 
    0.955
EKY28464.1
Biotin protein ligase domain protein; KEGG: cpf:CPF_0664 4.0e-31 birA; BirA bifunctional protein K03524.
  
 
 0.909
EKY28465.1
Putative biotin operon repressor; KEGG: cpf:CPF_0664 2.9e-44 birA; BirA bifunctional protein K03524; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.909
EKY28457.1
Iron-only hydrogenase maturation rSAM protein HydG; KEGG: hor:Hore_19320 8.0e-120 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 7.50.
 
  
0.859
EKY29071.1
ATP-grasp domain protein; KEGG: nth:Nther_2522 6.5e-86 carbamoyl phosphate synthase-like protein; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.800
EKY29072.1
Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein; KEGG: bvu:BVU_4042 5.1e-86 diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase; Psort location: Cytoplasmic, score: 7.50.
    
 0.667
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
 0.667
EKY24029.1
Putative rRNA methylase.
  
 
 0.662
EKY22075.1
Methyltransferase domain protein; KEGG: mma:MM_1949 1.4e-17 methyltransferase; K00599; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.662
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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