STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28333.1HD domain protein; KEGG: swp:swp_1405 1.9e-31 response regulator receiver:metal-dependent phosphohydrolase, HD subdomain protein K07814; Psort location: Cytoplasmic, score: 7.50. (171 aa)    
Predicted Functional Partners:
EKY28334.1
Diguanylate cyclase domain protein; KEGG: cby:CLM_0408 8.1e-35 sensory box histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
     0.987
EKY28829.1
Diguanylate cyclase domain protein; KEGG: hse:Hsero_3016 1.2e-27 response regulator protein; K11444 two-component system, chemotaxis family, response regulator WspR; Psort location: Cytoplasmic, score: 9.97.
 
 0.983
EKY23319.1
KEGG: ebr:ECB_01448 7.3e-25 yddV; predicted diguanylate cyclase; K13069 diguanylate cyclase; Psort location: CytoplasmicMembrane, score: 8.78.
 0.966
EKY27374.1
Diguanylate cyclase domain protein.
 
 0.837
EKY26110.1
KEGG: cbk:CLL_A2853 3.0e-271 5-methyltetrahydrofolate--homocysteine methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 7.50.
     
 0.770
EKY29811.1
KEGG: bmq:BMQ_1084 2.7e-64 diguanylate cyclase/phosphodiesterase; Psort location: CytoplasmicMembrane, score: 8.78.
 
   
 0.746
EKY27892.1
Cyclic diguanylate phosphodiesterase domain protein; KEGG: bmd:BMD_1467 2.6e-25 diguanylate cyclase/phosphodiesterase; Psort location: CytoplasmicMembrane, score: 9.51.
  
  
 0.746
EKY27727.1
Pyruvate kinase; KEGG: cbe:Cbei_4851 1.2e-187 pyruvate kinase K00873; Belongs to the pyruvate kinase family.
    
  0.730
EKY26139.1
Pyruvate kinase, barrel domain protein; KEGG: cbe:Cbei_1412 4.3e-73 pyruvate kinase K00873; Belongs to the pyruvate kinase family.
    
  0.730
EKY22283.1
Pyruvate kinase; KEGG: cbe:Cbei_0485 5.0e-182 pyruvate kinase K00873; Psort location: Cytoplasmic, score: 7.50.
    
  0.730
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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