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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28338.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (186 aa)    
Predicted Functional Partners:
EKY28337.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.858
EKY28336.1
KEGG: cno:NT01CX_2060 1.4e-10 putative AgrB-like protein, putative K07813; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.856
EKY28335.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.821
EKY28334.1
Diguanylate cyclase domain protein; KEGG: cby:CLM_0408 8.1e-35 sensory box histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.592
EKY28333.1
HD domain protein; KEGG: swp:swp_1405 1.9e-31 response regulator receiver:metal-dependent phosphohydrolase, HD subdomain protein K07814; Psort location: Cytoplasmic, score: 7.50.
       0.554
EKY28339.1
Peptidase, U32 family; KEGG: cth:Cthe_1010 4.6e-124 peptidase U32; K08303 putative protease; Psort location: Cytoplasmic, score: 7.50.
       0.407
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.