STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28340.1Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (386 aa)    
Predicted Functional Partners:
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 0.969
EKY22237.1
Condensation domain protein; KEGG: ppy:PPE_00083 2.2e-20 bacitracin synthetase 3; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.914
ddl
D-ala D-ala ligase protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
 
 0.901
ddl-2
D-ala D-ala ligase protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
 
 0.901
EKY27640.1
Cyanophycin synthase; KEGG: cbt:CLH_0462 2.0e-297 cphA; cyanophycin synthetase K03802; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.885
EKY25788.1
Putative D-amino-acid transaminase.
    
 0.875
EKY23257.1
Aminotransferase, class III; KEGG: gym:GYMC10_0624 8.6e-123 aminotransferase class-III; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.829
EKY28907.1
KEGG: cbe:Cbei_1924 3.4e-128 aspartate aminotransferase K09758; Psort location: Cytoplasmic, score: 7.50.
    
 0.825
EKY29328.1
Aminotransferase, class V; KEGG: cpr:CPR_0063 6.6e-148 aminotransferase, class V; K00839 aminotransferase; Psort location: Cytoplasmic, score: 9.97.
    
 0.824
EKY22200.1
Hydrolase, P-loop family; KEGG: rer:RER_19160 1.1e-14 ATPase K06925; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.727
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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