Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY28342.1Hypothetical protein. (83 aa)    
Predicted Functional Partners:
EKY28344.1
Hypothetical protein.
     0.974
EKY28343.1
Hypothetical protein.
 
     0.946
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.709
EKY26433.1
Hypothetical protein; KEGG: pfh:PFHG_01225 0.00091 hypothetical protein similar to DNA repair protein; K10866 DNA repair protein RAD50; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.707
EKY25650.1
Hypothetical protein.
  
     0.702
EKY27405.1
Glyoxalase family protein.
  
     0.678
EKY26367.1
Hypothetical protein; KEGG: snc:HMPREF0837_11378 3.6e-06 ABC superfamily transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.632
EKY28125.1
NPCBM/NEW2 domain protein; KEGG: sma:SAV_1475 3.2e-16 agaB2; alpha-galactosidase; K07407 alpha-galactosidase; Psort location: Cytoplasmic, score: 7.50.
  
     0.610
EKY25756.1
[2Fe-2S]-binding domain protein.
  
    0.603
EKY23872.1
Hypothetical protein; KEGG: edi:EDI_294890 0.00029 DNA mismatch repair protein MSH2.
  
     0.600
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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