STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28343.1Hypothetical protein. (54 aa)    
Predicted Functional Partners:
EKY28342.1
Hypothetical protein.
 
     0.946
EKY28344.1
Hypothetical protein.
 
     0.917
EKY26433.1
Hypothetical protein; KEGG: pfh:PFHG_01225 0.00091 hypothetical protein similar to DNA repair protein; K10866 DNA repair protein RAD50; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.713
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.709
EKY25650.1
Hypothetical protein.
  
     0.692
EKY27405.1
Glyoxalase family protein.
  
     0.666
EKY26367.1
Hypothetical protein; KEGG: snc:HMPREF0837_11378 3.6e-06 ABC superfamily transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.637
EKY22245.1
YhhN-like protein; KEGG: smf:Smon_1385 2.7e-05 signal transduction histidine kinase-like protein; K00936; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.603
EKY25459.1
Heme oxygenase; KEGG: cpf:CPF_0205 1.8e-58 heme oxygenase K00510; Psort location: Cytoplasmic, score: 7.50.
  
     0.590
EKY25471.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.589
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.