Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
EKY28345.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
EKY28344.1
Hypothetical protein.
       0.474
EKY28342.1
Hypothetical protein.
       0.408
EKY28343.1
Hypothetical protein.
       0.408
EKY28346.1
Selenium-dependent molybdenum hydroxylase 1; KEGG: cbo:CBO2881 3.2e-299 xdhAC; xanthine dehydrogenase family protein, molybdopterin-binding subunit; Psort location: CytoplasmicMembrane, score: 8.78.
       0.407
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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