Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY28353.1Hypothetical protein. (59 aa)    
Predicted Functional Partners:
EKY28351.1
Putative carbamoyltransferase YgeW; KEGG: mta:Moth_1996 3.8e-42 ornithine carbamoyltransferase; Psort location: Cytoplasmic, score: 9.95; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
       0.519
EKY28352.1
Putative selenium metabolism hydrolase; KEGG: eci:UTI89_C3257 7.8e-145 ygeY; peptidase; Psort location: Cytoplasmic, score: 7.50.
       0.519
EKY28350.1
Carbamate kinase; KEGG: cbk:CLL_A0624 6.1e-122 arcC; carbamate kinase K00926; Psort location: Cytoplasmic, score: 7.50.
       0.414
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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