Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY28059.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (298 aa)    
Predicted Functional Partners:
EKY22773.1
KEGG: npu:Npun_F4337 1.1e-05 anti-sigma-factor antagonist and sugar transfersase.
  
 
 0.823
EKY22771.1
RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
 
 0.781
EKY28058.1
Hypothetical protein.
       0.773
EKY28650.1
Hypothetical protein; KEGG: smf:Smon_0763 0.0069 riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.656
sigI
Putative RNA polymerase sigma factor SigI; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.
  
 
 0.656
EKY24077.1
Hypothetical protein; KEGG: edi:EDI_341030 7.1e-05 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.656
EKY28457.1
Iron-only hydrogenase maturation rSAM protein HydG; KEGG: hor:Hore_19320 8.0e-120 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 7.50.
   
    0.619
EKY23319.1
KEGG: ebr:ECB_01448 7.3e-25 yddV; predicted diguanylate cyclase; K13069 diguanylate cyclase; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.618
EKY28093.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.580
EKY27374.1
Diguanylate cyclase domain protein.
  
  
 0.555
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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