STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28064.1N-acetylmuramoyl-L-alanine amidase. (229 aa)    
Predicted Functional Partners:
EKY25785.1
SH3 domain protein.
 
 
 0.938
EKY27835.1
KEGG: cpe:CPE2367 8.4e-22 N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
  
 0.912
EKY24166.1
N-acetylmuramoyl-L-alanine amidase; KEGG: ccb:Clocel_2663 1.8e-48 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase.
 
0.898
EKY27836.1
Hypothetical protein; KEGG: cbe:Cbei_0188 3.6e-37 N-acetylmuramoyl-L-alanine amidase CwlD; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score: 7.50.
  
 0.857
EKY23065.1
Hypothetical protein; KEGG: csh:Closa_3064 2.6e-11 peptidoglycan glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.87.
   
 0.851
EKY28065.1
Toxin secretion/phage lysis holin.
       0.825
EKY29274.1
Hypothetical protein; KEGG: btl:BALH_3273 5.3e-20 N-acetylmuramoyl-L-alanine amidase; K01447 N-acetylmuramoyl-L-alanine amidase.
  
 
 0.818
EKY28068.1
Phage tail component protein.
 
    0.787
EKY28067.1
Phage minor structural protein.
 
    0.784
EKY25748.1
Ser/Thr phosphatase family protein.
  
 
  0.782
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.