Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY28065.1Toxin secretion/phage lysis holin. (136 aa)    
Predicted Functional Partners:
EKY28069.1
Phage tail tape measure protein, TP901 family.
 
    0.866
EKY28067.1
Phage minor structural protein.
 
    0.838
EKY28064.1
N-acetylmuramoyl-L-alanine amidase.
       0.825
EKY28061.1
Resolvase protein; KEGG: apb:SAR116_1288 0.00053 resolvase, N-terminal domain protein; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.823
EKY28082.1
Phage portal protein, HK97 family.
 
   
 0.823
EKY28060.1
Resolvase protein; KEGG: apb:SAR116_1288 4.5e-08 resolvase, N-terminal domain protein.
 
  
 0.821
EKY28080.1
Phage major capsid protein, HK97 family.
 
    0.821
EKY28085.1
Putative phage terminase, large subunit.
 
   
 0.804
EKY28063.1
Hypothetical protein.
 
   
 0.797
EKY28089.1
DNA (cytosine-5-)-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
 
    0.796
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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