STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28066.1Hypothetical protein. (450 aa)    
Predicted Functional Partners:
EKY28068.1
Phage tail component protein.
  
    0.807
EKY28067.1
Phage minor structural protein.
  
    0.805
EKY28069.1
Phage tail tape measure protein, TP901 family.
       0.797
EKY28065.1
Toxin secretion/phage lysis holin.
  
    0.783
EKY28064.1
N-acetylmuramoyl-L-alanine amidase.
       0.777
EKY28070.1
Hypothetical protein.
       0.704
EKY28071.1
Hypothetical protein.
       0.566
EKY28062.1
Hypothetical protein.
       0.512
EKY28063.1
Hypothetical protein.
       0.510
EKY28060.1
Resolvase protein; KEGG: apb:SAR116_1288 4.5e-08 resolvase, N-terminal domain protein.
       0.430
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.