Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY28068.1Phage tail component protein. (233 aa)    
Predicted Functional Partners:
EKY28067.1
Phage minor structural protein.
 
   0.984
EKY28069.1
Phage tail tape measure protein, TP901 family.
 
    0.954
EKY28075.1
Phage major tail protein, phi13 family.
 
    0.877
EKY28076.1
Hypothetical protein.
 
    0.853
EKY28078.1
Putative phage head-tail adaptor.
 
    0.810
EKY28066.1
Hypothetical protein.
  
    0.804
EKY28064.1
N-acetylmuramoyl-L-alanine amidase.
 
    0.787
EKY28065.1
Toxin secretion/phage lysis holin.
 
    0.779
EKY28070.1
Hypothetical protein.
       0.730
EKY28086.1
Phage terminase, small subunit, P27 family.
 
     0.723
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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