Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY28071.1Hypothetical protein. (107 aa)    
Predicted Functional Partners:
EKY28076.1
Hypothetical protein.
  
    0.760
EKY28068.1
Phage tail component protein.
  
    0.598
EKY28075.1
Phage major tail protein, phi13 family.
  
    0.593
EKY28069.1
Phage tail tape measure protein, TP901 family.
       0.585
EKY28070.1
Hypothetical protein.
       0.578
EKY28067.1
Phage minor structural protein.
       0.576
EKY28077.1
Phage protein, HK97 gp10 family.
  
    0.575
EKY28066.1
Hypothetical protein.
       0.556
EKY28065.1
Toxin secretion/phage lysis holin.
       0.516
EKY28064.1
N-acetylmuramoyl-L-alanine amidase.
       0.502
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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